475,243
edits
Kat
Joined 2 March 2020
→Progress: remove template
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=Progress= | =Progress= | ||
==Week before | |||
==Weeks before June 16== | |||
* extended ICBO workshop draft | |||
* Reviewed data set from Lucia | |||
==Weeks before May 26 2021== | |||
* Call recap | |||
* Joint food ontology call recap | |||
==Week before 4 May 2021== | |||
{| class="wikitable" | |||
|+ Item counts | |||
|- | |||
! Item class!! Count | |||
|- | |||
| food items (produce) || 592 | |||
|- | |||
| foods that are natural products of some taxon || 483 | |||
|- | |||
| foods with FoodOn id || 109 | |||
|- | |||
| ingested FCTs || 6 | |||
|} | |||
{| class="wikitable" | |||
|+ New Queries | |||
|- | |||
! Query topic !! Link | |||
|- | |||
| Foods with Smiling Laos food code || https://tinyurl.com/yjukcrck | |||
|- | |||
| Nutrient properties and related CHEBI ids || https://tinyurl.com/yeocz45v | |||
|} | |||
* Ran smiling Laos bot | |||
* Joint Food Ontology WG meeting 4/28 | |||
** http://obofoundry.org/ontology/cdno | |||
* 465,431 items in wikiFCD, available from: https://wikifcd.wiki.opencura.com/wiki/Special:Statistics | |||
* All items in wikiFCD that are in the class "taxon name" have a mapping to their equiv WD item. HMDB ids found on WD items. | |||
* 5/20 | |||
==Week before 27 April 2021== | |||
{| class="wikitable" | |||
|+ Item counts | |||
|- | |||
! Item class!! Count | |||
|- | |||
| food items (produce) || 477 | |||
|- | |||
| foods that are natural products of some taxon || 442 | |||
|- | |||
| foods with FoodOn id || 109 | |||
|- | |||
| ingested FCTs || 5 | |||
|} | |||
{| class="wikitable" | |||
|+ New Queries | |||
|- | |||
! Query topic !! Link | |||
|- | |||
| Food items with Smiling Vietnam food code || https://tinyurl.com/yeexgbyk | |||
|} | |||
* Ran Smiling Vietnam bot | |||
* In progress: manual clean up of common name from the bot run | |||
* Prepped Smiling Laos data | |||
* Drafted Smiling Laos bot | |||
== Week before 20 April 2021== | |||
* Prepared Smiling Vietnam data | |||
* Drafted Smiling Vietnam bot | |||
==Week before 13 April 2021== | |||
{| class="wikitable" | {| class="wikitable" | ||
|+ Item counts | |+ Item counts | ||
| Line 8: | Line 82: | ||
! Item class!! Count | ! Item class!! Count | ||
|- | |- | ||
| food items (produce) || | | food items (produce) || 311 | ||
|- | |- | ||
| foods that are natural products of some taxon || | | foods that are natural products of some taxon || 442 | ||
|- | |- | ||
| foods with FoodOn id || | | foods with FoodOn id || 109 | ||
|- | |- | ||
| ingested FCTs || | | ingested FCTs || 4 | ||
|} | |} | ||
{| class="wikitable" | {| class="wikitable" | ||
| Line 21: | Line 95: | ||
! Property ID !! EN Label !! Link !! datatype | ! Property ID !! EN Label !! Link !! datatype | ||
|- | |- | ||
| | | P315 || SMILING Thailand food code id ||[[Property:P315]] || string | ||
|} | |||
{| class="wikitable" | |||
|+ New Queries | |||
|- | |||
! Query topic !! Link | |||
|- | |||
| Foods with Smiling Thailand food code || https://tinyurl.com/yg76omv2 | |||
|- | |||
| Foods that are natural products of a plant taxon and an image of the plant|| https://tinyurl.com/yfjx9byl | |||
|- | |||
| Foods with Smiling Thailand food code that are natural products of a taxon and a pic of the taxon || https://tinyurl.com/yggsb8p4 | |||
|} | |||
* Created new document in Overleaf for workshop paper | |||
* Prepared Smiling Thailand CSV (mapping scientific names to Qids, removing -, nd) | |||
* ran bot for Smiling Thailand | |||
* cleaning up common names | |||
==Week before 6 April 2021== | |||
* Extended Nutrients draft | |||
* ICBO workshop (CEUR template, APC, timeline to publication, audience, quality/depth of feedback) | |||
* Cleaning up Smiling Cambodia data | |||
* Completed Malawi bot run | |||
{| class="wikitable" | |||
|+ New Queries | |||
|- | |||
! Query topic !! Link | |||
|- | |||
| Foods with Malawi food code || https://tinyurl.com/yz9j7has | |||
|} | |||
==Week before 1 April 2021== | |||
{| class="wikitable" | |||
|+ Item counts | |||
|- | |||
! Item class!! Count | |||
|- | |||
| food items (produce) || 173 | |||
|- | |- | ||
| | | foods that are natural products of some taxon || 367 | ||
|- | |- | ||
| | | foods with FoodOn id || 109 | ||
|- | |- | ||
| | | ingested FCTs || 3 | ||
|} | |||
{| class="wikitable" | |||
|+ New Properties | |||
|- | |- | ||
! Property ID !! EN Label !! Link !! datatype | |||
|- | |- | ||
| | | P313 || Smiling Cambodia food id ||[[Property:P313]] || string | ||
|- | |- | ||
| | | P314 || location sourced from || [[Property:P314]] || item | ||
|} | |} | ||
| Line 66: | Line 183: | ||
|- | |- | ||
| chemical compound|| phosphatidylcholine || [[Item:Q567992]] | | chemical compound|| phosphatidylcholine || [[Item:Q567992]] | ||
|} | |} | ||
| Line 79: | Line 190: | ||
! Query topic !! Link | ! Query topic !! Link | ||
|- | |- | ||
| || | | Foods with Smiling Cambodia food code || https://tinyurl.com/yzf8twmo | ||
|} | |} | ||
* 15, 16, 19, 20 April | |||
* Added new column to Cambodia CSV for Taxon ID | * Added new column to Cambodia CSV for Taxon ID | ||
* Replaced , with . in Cambodia CSV | * Replaced , with . in Cambodia CSV | ||
* Drafted Smiling Cambodia bot | * Drafted Smiling Cambodia bot | ||
* Smiling Cambodia bot run complete | |||
==Week before 23 March, 2021== | ==Week before 23 March, 2021== | ||