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Curating data related to food composition.
Progress
Week before 23 Feb, 2021
Item class | Count |
---|---|
food items | 57 |
foods that are natural products of some taxon | 72 |
Property ID | EN Label | Link | datatype |
---|---|---|---|
P305 | Phytic acid | Property:P305 | quantity |
P296 | quantity | ||
P297 | Property:P297 | quantity | |
P298 | Property:P298 | quantity | |
P299 | Property:P299 | quantity | |
P300 | Property:P300 | quantity | |
P301 | Property:P301 | quantity | |
class | EN Label | Link |
---|---|---|
chemical compound | Item:Q567677 | |
chemical compound | vitamin B12 | Item:Q567676 |
vitamin | Item:Q567678 | |
chemical element | zinc | Item:Q567679 |
chemical element | copper | Item:Q567680 |
chemical element | manganese | Item:Q567681 |
chemical element | selenium | Item:Q567682 |
chemical compound | vitamin C | Item:Q567683 |
chemical compound | Thiamine | Item:Q567684 |
chemical compound | riboflavin | Item:Q567685 |
chemical compound | niacin | Item:Q567686 |
chemical compound | pantothenic acid | Item:Q567687 |
chemical compound | vitamin B6 | Item:Q567688 |
chemical compound | sucrose | Item:Q567689 |
Malwaian food id | Item:Q567690 | |
chemical compound | glucose | Item:Q567691 |
chemical compound | fructose | Item:Q567692 |
chemical compound | lactose | Item:Q567693 |
chemical compound | maltose | Item:Q567694 |
chemical compound | galactose | Item:Q567695 |
chemical compound | folic acid | Item:Q567696 |
chemical compound | choline | Item:Q567697 |
chemical compound | Betaine | Property:P44 |
Query topic | Link |
---|---|
federated query for chemical compounds that are part of a biological pathway and the works that discuss this | https://tinyurl.com/ybtgwgby |
federated query for food items that are a natural product of a taxon in which a metabolite is known to be found showing food names | https://tinyurl.com/ya8e2mp3 |
- FoodEx2 could be a source of the broader categories for foods
- No idea if anyone has mapped between FoodEx2 and FDC
- Requested FoodEx2 SPARQL endpoint be considered for federation
- FoodEx2 record for lettuce: https://data.food.gov.uk/codes/foodtype/id/A05EC
- LanguaL has a really awesome thesaurus: https://www.langual.org/langual_thesaurus.asp?termid=B4958&haschildren=False&owner=B1231&openstr=00000_J0107_B1564_B1347_B1140_B1231
- LanguaL bot to parse XML and then write new items to wikiFCD
- FoodOn builds on LanguaL
- Only 7 items from FoodOn in Wikidata so far: https://w.wiki/$2A
- Would be great to mass import FoodOn into Wikidata or create Mix'n'Match catalog
Week before 16 Feb, 20201
Item class | Count |
---|---|
food items | 53 |
foods that are natural products of some taxon | 67 |
Property ID | EN Label | Link | datatype |
---|---|---|---|
P302 | sourcing circumstances | Property:P302 | item |
P303 | Wikibooks Cookbook Entry | Property:P303 | URL |
P304 | subject item of this property | Property:P304 | item |
class | EN Label | Link |
---|---|---|
sourcing circumstance | presumably | Item:Q567658 |
sourcing circumstance | misprint | Item:Q567660 |
sourcing circumstance | miscalculation | Item:Q567661 |
sourcing circumstance | approximately | Item:Q567662 |
sourcing circumstance | contradiction | Item:Q567663 |
taxon name | Koenigia alaskana | Item:Q567664 |
food item | Hop Shoots | Item:Q567657 |
food item | Narrowleaf Plantain | Item:Q567665 |
food item | Broadleaf Plantain | Item:Q567666 |
chemical element | calcium | Item:Q567669 |
chemical element | iron | Item:Q567671 |
chemical element | magnesium | Item:Q567672 |
chemical element | phosphorus | Item:Q567673 |
chemical element | potassium | Item:Q567674 |
food item | Purslane | Item:Q567668 |
Query topic | Link |
---|---|
Query for packaged food items from the sr_legacy dataset of FDC | https://tinyurl.com/yyp2oz6o |
Query for all properties with descriptions and aliases and types | https://tinyurl.com/y35fddfk |
Query for chemical elements with International Chemical Identifier | https://tinyurl.com/y68n4cbk |
Query for chemical elements with MeSH Tree Code(s) | https://tinyurl.com/y8uwcbmy |
Query for food items that are a natural product of some taxon | https://tinyurl.com/ya4p9onl |
Graph viz for food items that are a natural product of some taxon | https://tinyurl.com/y9pslqv8 |
- drinkkit
- Redesign Main Page
- Added ideas for contribution
- Report on searching for words like "raw", "fresh", "shoots", "leaves"
- Share example Item:Q562624
- Share example Item:Q562500
- Share example Item:Q209064, but several others listed https://en.wikipedia.org/wiki/Bamboo_shoot
- Share example Item:Q567665 look at use of qualifier on P
- Share CulinaryDB: Bagler, G. CulinaryDB: https://cosylab.iiitd.edu.in/culinarydb/. Indraprastha Institute
of Information Technology Delhi (IIIT-Delhi) (2017).
- How will we help users select between https://tinyurl.com/y66tj86q ?
- How will we help users select between 40+ brussels sprouts entries from FDC? (Advanced search for phrase)
- Review Item:Q562688 as example of why it might be confusing to combine USDA food items with other fct food items, would be difficult to ensure that people not assume that the common names and the natural product of taxon info from Edible Wild Foods is also valid for the FDC statements
- Draft of Introducing WikiFCD for Nutrients
- NSF grant: Expanded text for Projects B and C
- Great paper calling for projects like ours: https://academic.oup.com/database/article/doi/10.1093/database/baab003/6119904
- figure 1
- figure 3
- comprehensive list of ontologies and knowledge bases
- Their approach is a biomedical ontologist's approach -> we can enhance this approach with Wikidata
- Path forward for NIH funding for personalized medicine
- Potential collaborators
- Leverage the working groups mappings
- https://github.com/FoodOntology/joint-food-ontology-wg
Week before Feb 9, 20201
Property ID | EN Label | Link | datatype |
---|---|---|---|
P295 | Dehydroascorbic acid | Property:P295 | quantity |
P296 | Vitamin K | Property:P296 | quantity |
P297 | Phenolic acids | Property:P297 | quantity |
P298 | Hydroxibenzoic acids | Property:P298 | quantity |
P299 | Hydroxycinnamic acids | Property:P299 | quantity |
P300 | Flavonols | Property:P300 | quantity |
P301 | Anthocyanins | Property:P301 | quantity |
class | EN Label | Link |
---|---|---|
taxon name | Wasabia koreana | Item:Q567651 |
food item | Lamb's quarters | Item:Q567652 |
food item | Skeleton weed | Item:Q567653 |
food item | Shepherd’s-purse | Item:Q567650 |
food item | Chicory | Item:Q567654 |
food item | Hawthorn berries | Item:Q567655 |
food item | Wild fennel | Item:Q567656 |
Query topic | Link |
---|---|
Wikidata query for items with OFF ingredient id and the articles about these foods in all 'pedias with lang label |
Week before Feb 2, 20201
Property ID | EN Label | Link | datatype |
---|---|---|---|
P283 | editor | Property:P283 | string |
P284 | Oxalic acid | Property:P284 | quantity |
P285 | Fumaric acid | Property:P285 | quantity |
P286 | Phenolics | Property:P286 | quantity |
P287 | Flavonoids | Property:P287 | quantity |
P289 | Carotenoids | Property:P289 | quantity |
P290 | Neoxanthin | Property:P290 | quantity |
P291 | Violaxanthin | Property:P291 | quantity |
P292 | Quinic acid | Property:P292 | quantity |
P293 | Shikimic acid | Property:P293 | quantity |
P294 | Nitrate | Property:P294 | quantity |
class | EN Label | Link |
---|---|---|
food item | fool's watercress | Item:Q567642 |
food item | borage | Item:Q567643 |
food item | wild leek | Item:Q567641 |
food item | shepard's purse | Item:Q567650 |
unit | cup(s) | Item:Q567645 |
unit | Tbs | Item:Q567647 |
unit | tsp | Item:Q567648 |
dish | granola | Item:Q567644 |
dish | granola | Item:Q567649 |
packaged food item | ground flaxseed | Item:Q567646 |
FCT | Mediterranean Wild Edible Plants | Item:Q567640 |
Query topic | Link |
---|---|
Query for ranked list of items containing most to least DHA (Docosahexaenoic acid) listed in this wikibase |