475,243
edits
Kat
Joined 2 March 2020
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=Progress= | =Progress= | ||
==Week before | |||
==Weeks before June 16== | |||
* extended ICBO workshop draft | |||
* Reviewed data set from Lucia | |||
==Weeks before May 26 2021== | |||
* Call recap | |||
* Joint food ontology call recap | |||
==Week before 4 May 2021== | |||
{| class="wikitable" | {| class="wikitable" | ||
|+ Item counts | |+ Item counts | ||
| Line 8: | Line 18: | ||
! Item class!! Count | ! Item class!! Count | ||
|- | |- | ||
| food items (produce) || | | food items (produce) || 592 | ||
|- | |- | ||
| foods that are natural products of some taxon || | | foods that are natural products of some taxon || 483 | ||
|- | |- | ||
| foods with FoodOn id || 109 | | foods with FoodOn id || 109 | ||
|- | |- | ||
| ingested FCTs || | | ingested FCTs || 6 | ||
|} | |} | ||
{| class="wikitable" | {| class="wikitable" | ||
|+ New | |+ New Queries | ||
|- | |- | ||
! | ! Query topic !! Link | ||
|- | |- | ||
| | | Foods with Smiling Laos food code || https://tinyurl.com/yjukcrck | ||
|- | |- | ||
| | | Nutrient properties and related CHEBI ids || https://tinyurl.com/yeocz45v | ||
|} | |} | ||
* Ran smiling Laos bot | |||
* Joint Food Ontology WG meeting 4/28 | |||
** http://obofoundry.org/ontology/cdno | |||
* 465,431 items in wikiFCD, available from: https://wikifcd.wiki.opencura.com/wiki/Special:Statistics | |||
* All items in wikiFCD that are in the class "taxon name" have a mapping to their equiv WD item. HMDB ids found on WD items. | |||
* 5/20 | |||
==Week before 27 April 2021== | |||
{| class="wikitable" | {| class="wikitable" | ||
|+ | |+ Item counts | ||
|- | |- | ||
! class !! | ! Item class!! Count | ||
|- | |- | ||
| | | food items (produce) || 477 | ||
|- | |- | ||
| | | foods that are natural products of some taxon || 442 | ||
|- | |- | ||
| | | foods with FoodOn id || 109 | ||
|- | |- | ||
| | | ingested FCTs || 5 | ||
|} | |||
{| class="wikitable" | |||
|+ New Queries | |||
|- | |- | ||
! Query topic !! Link | |||
|- | |- | ||
| | | Food items with Smiling Vietnam food code || https://tinyurl.com/yeexgbyk | ||
|} | |||
* Ran Smiling Vietnam bot | |||
* In progress: manual clean up of common name from the bot run | |||
* Prepped Smiling Laos data | |||
* Drafted Smiling Laos bot | |||
== Week before 20 April 2021== | |||
* Prepared Smiling Vietnam data | |||
* Drafted Smiling Vietnam bot | |||
==Week before 13 April 2021== | |||
{| class="wikitable" | |||
|+ Item counts | |||
|- | |- | ||
! Item class!! Count | |||
|- | |- | ||
| | | food items (produce) || 311 | ||
|- | |- | ||
| | | foods that are natural products of some taxon || 442 | ||
|- | |- | ||
| | | foods with FoodOn id || 109 | ||
|- | |- | ||
| | | ingested FCTs || 4 | ||
|} | |||
{| class="wikitable" | |||
|+ New Properties | |||
|- | |- | ||
! Property ID !! EN Label !! Link !! datatype | |||
|- | |- | ||
| | | P315 || SMILING Thailand food code id ||[[Property:P315]] || string | ||
|} | |} | ||
{| class="wikitable" | {| class="wikitable" | ||
| Line 63: | Line 104: | ||
! Query topic !! Link | ! Query topic !! Link | ||
|- | |- | ||
| Foods with Smiling | | Foods with Smiling Thailand food code || https://tinyurl.com/yg76omv2 | ||
|- | |||
| Foods that are natural products of a plant taxon and an image of the plant|| https://tinyurl.com/yfjx9byl | |||
|- | |||
| Foods with Smiling Thailand food code that are natural products of a taxon and a pic of the taxon || https://tinyurl.com/yggsb8p4 | |||
|} | |} | ||
* Created new document in Overleaf for workshop paper | |||
* Prepared Smiling Thailand CSV (mapping scientific names to Qids, removing -, nd) | |||
* ran bot for Smiling Thailand | |||
* cleaning up common names | |||
==Week before 6 April 2021== | ==Week before 6 April 2021== | ||
* Extended Nutrients draft | * Extended Nutrients draft | ||